The serious amateur and the cult of ignorance

The opening of the six-part fugue from The Musical Offering, in Bach’s handAmongst the other things that I do I am a fairly serious amateur musician. I sing regularly and irregularly in choirs, have occassionally done some solo vocal work, conduct a bit, and in the past written fairly substantial pieces of music for orchestra and choir. When I started university I made a choice between doing music or doing science. Like a lot of other scientists I suspect I chose to go down the science route because it is much easier to be an amateur musician than and amateur scientists. I don’t regret the decisions I made then but like anyone I do think back to what might have been.

One of the criticisms of open practice in science and Open Notebook Science in particular is that we open up ourselves to harassment by ‘nutjobs’, ‘ignorant plebs’, and assorted other people who don’t appreciate a) how clever we are or b) how busy we are. There are two sides to this argument with merits on both. It is possible to get bogged down continually dealing with people who genuinely wish to explain to you how universal crystal harmonics explain the periodicity of the elements, or how their understanding of the interstitial spiritual lamina demonstrates the inadvisability of human cloning. There is no getting over the fact that there are nutters out there. On the other hand we do little to encourage the amateur scientist beyond allowing them occasional access to our hallowed existence through TV, NewScientist, and Wired. I wondered whether an exploration of the parallels between amateur music and amateur science might be interesting. I should note that I am using the term professional in rather a loose way here, not to mean whether someone that gets paid to do something, but someone who can devote the majority of their time to a specific pursuit, be that music, science, or anything else. Continue reading “The serious amateur and the cult of ignorance”

Protocols for Open Science

interior detail, stata center, MIT. just outside science commons offices.

One of the strong messages that came back from the workshop we held at the BioSysBio meeting was that protocols and standards of behaviour were something that people would appreciate having available. There are many potential issues that are raised by the idea of a ‘charter’ or ‘protocol’ for open science but these are definitely things that are worth talking about. I thought I would through a few ideas out and see where they go. There are some potentially serious contradictions to be worked through. Continue reading “Protocols for Open Science”

The economic case for Open Science

I am thinking about how to present the case for Open Science, Open Notebook Science, and Open Data at Science in the 21st Century, the meeting being organised by Sabine Hossenfelder and Michael Nielsen at the Perimeter Institute for Theoretical Physics. I’ve put up a draft abstract and as you might guess from this I wanted to make an economic case that the waste of resources, both human and monetary is not something that is sustainable for the future. Here I want to rehearse that argument a bit further as well as explore the business case that could be presented to Google/Gates Foundation as a package that would include the development of the Science Exchange ideas that I blogged about last week. Continue reading “The economic case for Open Science”

Somewhat more complete report on BioSysBio workshop

The Queen's Tower, Imperial CollegeImage via Wikipedia

This has taken me longer than expected to write up. Julius Lucks, John Cumbers, and myself lead a workshop on Open Science on Monday 21st at the BioSysBio meeting at Imperial College London.  I had hoped to record screencast, audio, and possibly video as well but in the end the laptop I am working off couldn’t cope with both running the projector and Camtasia at the same time with reasonable response rates (its a long story but in theory I get my ‘proper’ laptop back tomorrow so hopefully better luck next time). We had somewhere between 25 and 35 people throughout most of the workshop and the feedback was all pretty positive. What I found particularly exciting was that, although the usual issues of scooping, attribution, and the general dishonestly of the scientific community were raised, they were only in passing, with a lot more of the discussion focussing on practical issues. Continue reading “Somewhat more complete report on BioSysBio workshop”

Science in the 21st Century

Perimiter InstitutePerimeter Institute by hungryhungrypixels (Picture found by Zemanta).

Sabine Hossenfelder and Michael Nielsen of the Perimeter Institute for Theoretical Physics are organising a conference called ‘Science in the 21st Century‘ which was inspired in part by SciBarCamp. I am honoured, and not a little daunted, to have been asked to speak considering the star studded line up of speakers including, well lots of really interesting people, read the list. The meeting looks to be a really interesting mix of science, tools, and how these interact with people (and scientists). I’m looking forward to it. Continue reading “Science in the 21st Century”

Open Science in the Undergraduate Laboratory: Could this be the success story we’re looking for?

A whole series of things have converged in the last couple of days for me. First was Jean-Claude’s description of the work [1, 2] he and Brent Friesen of the Dominican University are doing putting the combi-Ugi project into an undergraduate laboratory setting. The students will make new compounds which will then be sent for testing as antimalarial agents by Phil Rosenthal at UCSF. This is a great story and a testament in particular to Brent’s work to make the laboratory practical more relevant and exciting for his students.

At the same time I get an email from Anna Croft, University of Bangor, Wales, after meeting up the previous day; Continue reading “Open Science in the Undergraduate Laboratory: Could this be the success story we’re looking for?”

Network grant proposal unsuccessful

I received the rejection letter late last week but hadn’t got as far as posting about this yet. Given the referee’s comments this was not surprising. We were ranked 20 out of 21 proposals that were considered by the panel. This is not nearly so bad as it sounds. The story as that there were over a hundred proposals so to actually get to the panel wasn’t a bad thing in its own right. The other positive thing to take from this is that the referee’s comments were very clear about what the problems were: too much discussion of the type of things we would like to do, and not enough about how we would get more people involved, or how we would disseminate information. Basically it wasn’t focussed well as a Network application, which is not suprising in light of the fact that I had never been involved in one before so I didn’t really know what is was ‘supposed’ to look like.

We are allowed the resubmit the grant in six months time and I would be inclined to do so. The original proposal document as well as the final submitted version (there are significant differences – I needed to cut a lot to make it fit) is still available for viewing or editing and it ought to be possible to re-jig it over the next six months in light of the referee’s comments.

p.s. Am using Zemanta which looks potentially like a great tool in principle for getting more consistency into the use of tags and linking the information up. Something I am very much in favour of. However it appears to have decided that this post is about Volkswagens. Go figure.

Open Science at PSB – Call for submissions

What Shirley said:

The call for participation for the Open Science workshop at PSB 2009 is now up! We welcome anyone with an interest in open science to submit proposals for talks. Note that although space is limited for talks and demos, anyone who registers for the conference can present a poster, so we also encourage poster submissions!

Please if you are interested in submitting a talk or poster get in touch. We would like to have a good and robust discussion with a range of perspectives on a range of topics. We are limited with respect to the time available so there will be some tough decisions to make. Nonetheless, please do get in touch; we would very much like to have a good representation of posters as well as talks. If there is interest then we can organise an unofficial session on the side of the meeting to take things further, perhaps towards ‘Open Science 2009’  a meeting in its own right?